Publications

A Predictive Autoantibody Signature in Multiple Sclerosis.

Zamecnik CR, Sowa GM, Abdelhak A, Dandekar R, Bair RD, Wade KJ, Bartley CM, Tubati A, Gomez R, Fouassier C, Gerungan C, Alexander J, Wapniarski AE, Loudermilk RP, Eggers EL, Zorn KC, Ananth K, Jabassini N, Mann SA, Ragan NR, Santaniello A, Henry RG, Baranzini SE, Zamvil SS, Bove RM, Guo CY, Gelfand JM, Cuneo R, von Büdingen HC, Oksenberg JR, Cree BA, Hollenbach JA, Green AJ, Hauser SL, Wallin MT, DeRisi JL, Wilson MR

medRxiv : the preprint server for health sciences, 2023

Early detection of Parkinson's disease through enriching the electronic health record using a biomedical knowledge graph.

Soman K, Nelson CA, Cerono G, Goldman SM, Baranzini SE, Brown EG

Frontiers in medicine, 2023

Integration of epigenetic and genetic profiles identifies multiple sclerosis disease-critical cell types and genes.

Ma Q, Shams H, Didonna A, Baranzini SE, Cree BAC, Hauser SL, Henry RG, Oksenberg JR

Communications biology, 2023

The scalable precision medicine open knowledge engine (SPOKE): A massive knowledge graph of biomedical information.

Morris JH, Soman K, Akbas RE, Zhou X, Smith B, Meng EC, Huang CC, Cerono G, Schenk G, Rizk-Jackson A, Harroud A, Sanders L, Costes SV, Bharat K, Chakraborty A, Pico AR, Mardirossian T, Keiser M, Tang A, Hardi J, Shi Y, Musen M, Israni S, Huang S, Rose PW, Nelson CA, Baranzini SE

Bioinformatics (Oxford, England), 2023

Time-aware Embeddings of Clinical Data using a Knowledge Graph.

Soman K, Nelson CA, Cerono G, Baranzini SE

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 2023

Gut microbiome of multiple sclerosis patients and paired household healthy controls reveal associations with disease risk and course.

iMSMS Consortium. Electronic address: [email protected], iMSMS Consortium

Cell, 2022

The role of the gut microbiota in multiple sclerosis.

Correale J, Hohlfeld R, Baranzini SE

Nature reviews. Neurology, 2022

FutureMS cohort profile: a Scottish multicentre inception cohort study of relapsing-remitting multiple sclerosis.

Kearns PKA, Martin SJ, Chang J, Meijboom R, York EN, Chen Y, Weaver C, Stenson A, Hafezi K, Thomson S, Freyer E, Murphy L, Harroud A, Foley P, Hunt D, McLeod M, O'Riordan J, Carod-Artal FJ, MacDougall NJJ, Baranzini SE, Waldman AD, Connick P, Chandran S

BMJ open, 2022

Progress Toward a Universal Biomedical Data Translator.

Fecho K, Thessen AT, Baranzini SE, Bizon C, Hadlock JJ, Huang S, Roper RT, Southall N, Ta C, Watkins PB, Williams MD, Xu H, Byrd W, Dancík V, Duby MP, Dumontier M, Glusman G, Harris NL, Hinderer EW, Hyde G, Johs A, Su A, Qin G, Zhu Q, Biomedical Data Translator Consortium

Clinical and translational science, 2022

A biomedical open knowledge network harnesses the power of AI to understand deep human biology.

Baranzini SE, Börner K, Morris J, Nelson CA, Soman K, Schleimer E, Keiser M, Musen M, Pearce R, Reza T, Smith B, Herr BW, Oskotsky B, Rizk-Jackson A, Rankin KP, Sanders SJ, Bove R, Rose PW, Israni S, Huang S

AI magazine, 2022

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